HMMER3/f [3.1b1 | May 2013] NAME Clavanin_msa LENG 23 ALPH amino RF no MM no CONS yes CS no MAP yes DATE Tue Dec 10 17:24:52 2013 NSEQ 5 EFFN 4.155273 CKSUM 3011863437 STATS LOCAL MSV -6.2957 0.72027 STATS LOCAL VITERBI -6.8802 0.72027 STATS LOCAL FORWARD -4.6112 0.72027 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 3.42230 5.58604 4.91640 4.64518 2.13626 1.97889 1.98790 2.16103 3.65271 2.25207 4.48984 3.62325 5.23722 4.15608 3.52777 3.14584 4.37106 1.98596 5.85362 3.77186 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00831 5.19025 5.91260 0.61958 0.77255 0.00000 * 1 2.04004 4.79408 5.30059 4.78476 1.43468 4.53338 5.07974 2.67525 4.63023 2.80712 3.92318 4.78302 4.96996 4.78899 4.70079 3.90649 3.67671 1.08321 5.55198 4.27813 1 v - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00831 5.19025 5.91260 0.61958 0.77255 0.48576 0.95510 2 4.73839 5.85668 6.34649 5.96210 0.77837 5.87829 5.31440 3.26673 5.79845 0.99111 3.72013 5.83954 5.90576 5.50641 5.64488 5.34682 4.93371 3.60017 5.30360 3.76607 2 f - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00831 5.19025 5.91260 0.61958 0.77255 0.48576 0.95510 3 3.86385 6.04021 4.38767 3.55520 5.62345 4.45357 2.21386 4.91187 1.67450 4.24130 5.09933 3.93148 4.77273 1.56405 1.20572 3.82244 3.98649 4.57206 6.20037 5.08162 3 r - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00831 5.19025 5.91260 0.61958 0.77255 0.48576 0.95510 4 4.74351 5.86086 6.31949 5.95276 0.69567 5.85248 5.24675 3.29903 5.78473 1.10464 3.75915 5.79668 5.90031 5.49919 5.63275 5.32174 4.94139 3.62193 5.24696 3.68616 4 f - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00831 5.19025 5.91260 0.61958 0.77255 0.48576 0.95510 5 4.48153 5.62747 6.48247 5.95617 3.85600 6.01686 6.39053 1.17221 5.84181 0.63827 3.57707 6.21319 5.94385 5.65509 5.77016 5.48781 4.69167 2.89575 6.20547 5.27338 5 L - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00831 5.19025 5.91260 0.61958 0.77255 0.48576 0.95510 6 4.85511 6.33691 5.70659 5.77132 6.62276 0.05208 6.62388 6.67145 6.06312 6.05493 7.14621 5.87907 5.71705 6.30135 6.02466 5.08092 5.39838 5.99960 7.25742 6.80943 6 G - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00831 5.19025 5.91260 0.61958 0.77255 0.48576 0.95510 7 3.71197 5.91291 4.16998 3.44369 5.47994 4.33412 4.25612 4.81017 1.34698 4.18411 5.02762 3.84819 4.69247 3.37449 1.38538 1.39430 3.87629 4.45018 6.17972 5.01828 7 k - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00831 5.19025 5.91260 0.61958 0.77255 0.48576 0.95510 8 4.02037 5.18115 6.19666 5.78715 4.67510 5.77008 6.77290 0.70517 5.78580 3.01728 4.35199 5.96535 5.95703 6.09742 5.99984 5.26362 4.28964 1.00565 6.97226 5.70947 8 i - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00831 5.19025 5.91260 0.61958 0.77255 0.48576 0.95510 9 4.36154 5.59251 6.01378 5.78640 4.70358 5.39618 6.44307 0.21157 5.69862 3.16245 4.57132 5.91848 5.84394 5.98794 5.77696 5.19673 4.67990 2.71420 6.70295 5.52385 9 I - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00831 5.19025 5.91260 0.61958 0.77255 0.48576 0.95510 10 5.33287 6.59927 5.34879 5.32818 5.14537 5.18011 0.07422 6.31604 5.23851 5.54339 6.78655 5.64056 5.81992 5.75650 5.33907 5.46023 5.72818 6.00485 6.47055 5.09630 10 H - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00831 5.19025 5.91260 0.61958 0.77255 0.48576 0.95510 11 4.05932 5.93175 4.23508 4.19488 5.34954 1.11229 0.65247 5.63418 4.42584 5.11002 6.06475 4.56901 5.16202 4.80827 4.70232 4.16512 4.51783 5.08640 6.62089 5.29129 11 H - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00831 5.19025 5.91260 0.61958 0.77255 0.48576 0.95510 12 4.01750 5.17802 6.19526 5.78615 4.68563 5.76983 6.77748 1.05915 5.78607 3.03031 4.36141 5.96426 5.95772 6.10249 6.00285 5.26332 4.28690 0.66579 6.98211 5.71456 12 V - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00831 5.19025 5.91260 0.61958 0.77255 0.48576 0.95510 13 4.85511 6.33691 5.70659 5.77132 6.62276 0.05208 6.62388 6.67145 6.06312 6.05493 7.14621 5.87907 5.71705 6.30135 6.02466 5.08092 5.39838 5.99960 7.25742 6.80943 13 G - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00831 5.19025 5.91260 0.61958 0.77255 0.48576 0.95510 14 3.93413 6.12681 3.37777 3.33425 4.77618 4.22630 1.27115 5.26941 3.65476 4.68916 5.64680 0.76841 4.86855 4.03813 4.02547 3.88545 4.26863 4.84751 6.18922 4.62043 14 n - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00831 5.19025 5.91260 0.61958 0.77255 0.48576 0.95510 15 4.73839 5.85668 6.34649 5.96210 0.77837 5.87829 5.31440 3.26673 5.79845 0.99111 3.72013 5.83954 5.90576 5.50641 5.64488 5.34682 4.93371 3.60017 5.30360 3.76607 15 f - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00831 5.19025 5.91260 0.61958 0.77255 0.48576 0.95510 16 4.12991 5.48785 5.87922 5.69660 4.96533 5.07648 6.41714 2.86768 5.63955 3.51154 4.84285 5.69975 5.66013 5.95760 5.72992 4.78842 4.51173 0.19337 6.85260 5.66963 16 V - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00831 5.19025 5.91260 0.61958 0.77255 0.48576 0.95510 17 5.11388 6.18901 5.50352 5.39485 2.80309 5.48129 0.65360 4.95918 5.11898 4.08197 5.44815 5.06555 5.82036 5.18157 5.12251 4.97818 5.33217 4.88351 4.47624 1.16262 17 H - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00831 5.19025 5.91260 0.61958 0.77255 0.48576 0.95510 18 4.03066 5.90852 4.22696 4.18958 5.37826 0.63956 1.13649 5.62993 4.43849 5.11175 6.06050 4.55960 5.14771 4.80949 4.71787 4.13942 4.49418 5.07112 6.64316 5.32322 18 G - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00831 5.19025 5.91260 0.61958 0.77255 0.48576 0.95510 19 4.30727 5.50633 6.06404 5.66821 0.81511 5.52848 5.24907 1.18593 5.51842 2.49283 3.93636 5.56325 5.72487 5.43596 5.47389 4.96594 4.54604 2.95419 5.33472 3.77096 19 f - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00831 5.19025 5.91260 0.61958 0.77255 0.48576 0.95510 20 3.12392 5.05498 4.71644 4.69293 5.80476 1.15045 5.70848 5.37071 4.94469 5.03042 5.78769 4.50263 4.65846 5.07601 5.09575 0.66370 3.70423 4.45846 7.09537 6.01980 20 S - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00831 5.19025 5.91260 0.61958 0.77255 0.48576 0.95510 21 3.68899 5.31658 4.63167 4.34156 3.98452 4.45753 0.82778 3.59654 4.06061 3.53907 4.64917 4.54444 5.02546 4.53985 4.25031 3.95456 4.03729 1.21368 5.58478 4.07101 21 h - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00831 5.19025 5.91260 0.61958 0.77255 0.48576 0.95510 22 1.23195 4.98825 5.43552 5.16619 4.78966 4.27687 5.80708 2.88579 5.07025 3.47442 4.63356 4.92910 4.99493 5.28563 5.17290 3.76034 3.81787 0.71872 6.56111 5.37758 22 v - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00831 5.19025 5.91260 0.61958 0.77255 0.48576 0.95510 23 4.73839 5.85668 6.34649 5.96210 0.77837 5.87829 5.31440 3.26673 5.79845 0.99111 3.72013 5.83954 5.90576 5.50641 5.64488 5.34682 4.93371 3.60017 5.30360 3.76607 23 f - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00560 5.18754 * 0.61958 0.77255 0.00000 * //