HMMER3/f [3.1b1 | May 2013] NAME Pseudin_msa LENG 24 ALPH amino RF no MM no CONS yes CS no MAP yes DATE Tue Dec 10 17:41:54 2013 NSEQ 4 EFFN 2.488281 CKSUM 3969921643 STATS LOCAL MSV -6.4873 0.72021 STATS LOCAL VITERBI -6.7882 0.72021 STATS LOCAL FORWARD -4.6643 0.72021 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 3.04572 5.31503 4.26509 2.94483 3.74117 2.43182 2.58015 2.31535 2.20977 2.05090 4.40157 2.42234 4.80130 2.84997 4.12832 3.47544 3.31601 2.34897 6.01029 4.81543 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01250 4.78373 5.50608 0.61958 0.77255 0.00000 * 1 4.12415 5.72252 4.95731 4.98831 5.95740 0.11091 5.95240 5.86440 5.27299 5.34922 6.39059 5.12552 5.12059 5.52861 5.32857 4.33215 4.66183 5.22602 6.73363 6.11593 1 G - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01250 4.78373 5.50608 0.61958 0.77255 0.48576 0.95510 2 3.97372 5.16932 5.91353 5.38981 3.60860 5.44080 5.84652 1.08437 5.25211 0.87453 3.35498 5.59860 5.49924 5.21865 5.25647 4.87143 4.19814 2.44452 5.85775 4.84373 2 l - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01250 4.78373 5.50608 0.61958 0.77255 0.48576 0.95510 3 3.85064 5.71991 3.70905 3.71766 5.27594 4.11796 5.11708 5.29720 4.17358 4.82950 5.84458 0.23712 4.83422 4.46700 4.49744 3.92560 4.29833 4.80641 6.43786 5.21674 3 N - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01250 4.78373 5.50608 0.61958 0.77255 0.48576 0.95510 4 1.45582 4.61152 4.44857 4.20861 4.93613 3.44590 5.07976 4.16691 4.17782 4.00778 4.87560 4.07397 4.25461 4.42859 4.37593 2.92769 0.72347 3.62183 6.33350 5.19152 4 t - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01250 4.78373 5.50608 0.61958 0.77255 0.48576 0.95510 5 4.35966 5.59554 5.65049 5.36807 3.76829 5.13903 5.77858 3.07101 5.15891 0.24582 3.63320 5.58400 5.47057 5.28018 5.15592 4.96249 4.63349 3.32473 5.87543 4.78778 5 L - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01250 4.78373 5.50608 0.61958 0.77255 0.48576 0.95510 6 4.15336 5.93937 4.38573 3.92627 5.56261 4.42261 4.67327 5.09648 0.25861 4.48524 5.47111 4.27611 4.91810 3.86625 3.09687 4.18240 4.37019 4.77940 6.27813 5.28768 6 K - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01250 4.78373 5.50608 0.61958 0.77255 0.48576 0.95510 7 4.15336 5.93937 4.38573 3.92627 5.56261 4.42261 4.67327 5.09648 0.25861 4.48524 5.47111 4.27611 4.91810 3.86625 3.09687 4.18240 4.37019 4.77940 6.27813 5.28768 7 K - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01250 4.78373 5.50608 0.61958 0.77255 0.48576 0.95510 8 3.64940 5.03812 5.34811 5.10984 4.43288 4.64542 5.82966 2.44792 5.01384 3.00323 4.32022 5.15263 5.21017 5.34003 5.13844 4.27175 4.02000 0.33607 6.32937 5.10393 8 V - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01250 4.78373 5.50608 0.61958 0.77255 0.48576 0.95510 9 3.79291 5.04289 5.56483 5.10100 1.18869 5.03642 4.98112 1.11903 4.94955 2.15731 3.56033 5.09937 5.26317 4.95994 4.96023 4.43494 4.03101 2.54271 5.13885 3.65248 9 i - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01250 4.78373 5.50608 0.61958 0.77255 0.48576 0.95510 10 4.08748 5.88151 3.98549 3.84498 5.20558 4.31547 4.97014 5.10631 3.62431 4.48913 5.57901 4.27973 4.93099 0.24750 3.84898 4.14080 4.42711 4.79168 6.30489 5.14444 10 Q - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01250 4.78373 5.50608 0.61958 0.77255 0.48576 0.95510 11 4.12415 5.72252 4.95731 4.98831 5.95740 0.11091 5.95240 5.86440 5.27299 5.34922 6.39059 5.12552 5.12059 5.52861 5.32857 4.33215 4.66183 5.22602 6.73363 6.11593 11 G - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01250 4.78373 5.50608 0.61958 0.77255 0.48576 0.95510 12 4.05843 5.24913 5.96874 5.43432 3.54056 5.50221 5.85670 1.49361 5.28794 0.61039 3.28331 5.66122 5.51995 5.20256 5.26536 4.93563 4.27395 2.60165 5.81568 4.83318 12 L - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01250 4.78373 5.50608 0.61958 0.77255 0.48576 0.95510 13 4.51327 5.99344 4.53922 4.45481 4.41119 4.57836 0.17447 5.39806 4.31252 4.71965 5.89734 4.79692 5.20168 4.85832 4.47780 4.60740 4.88013 5.10847 5.81434 4.35444 13 H - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01250 4.78373 5.50608 0.61958 0.77255 0.48576 0.95510 14 4.15559 6.17014 3.34173 0.22920 5.70533 4.18470 4.97028 5.40478 4.01738 4.88285 5.91720 3.92233 4.85321 4.22969 4.46105 4.08969 4.49647 5.01879 6.65648 5.53830 14 E - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01250 4.78373 5.50608 0.61958 0.77255 0.48576 0.95510 15 1.11611 4.64005 4.82086 4.47483 4.33018 3.88850 5.18058 2.68937 4.38360 3.10493 4.21591 4.40575 4.57475 4.63023 4.54998 3.34635 3.42140 1.07048 6.01049 4.81957 15 v - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01250 4.78373 5.50608 0.61958 0.77255 0.48576 0.95510 16 3.86858 5.13530 5.51259 5.22551 4.19189 4.98585 5.87942 0.36927 5.09418 2.66591 4.06052 5.37345 5.40480 5.39357 5.20461 4.65571 4.17668 2.28232 6.20289 4.98814 16 I - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01250 4.78373 5.50608 0.61958 0.77255 0.48576 0.95510 17 4.15336 5.93937 4.38573 3.92627 5.56261 4.42261 4.67327 5.09648 0.25861 4.48524 5.47111 4.27611 4.91810 3.86625 3.09687 4.18240 4.37019 4.77940 6.27813 5.28768 17 K - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01250 4.78373 5.50608 0.61958 0.77255 0.48576 0.95510 18 4.35966 5.59554 5.65049 5.36807 3.76829 5.13903 5.77858 3.07101 5.15891 0.24582 3.63320 5.58400 5.47057 5.28018 5.15592 4.96249 4.63349 3.32473 5.87543 4.78778 18 L - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01250 4.78373 5.50608 0.61958 0.77255 0.48576 0.95510 19 3.68395 4.87142 5.79125 5.35404 4.28206 5.33642 6.18596 0.93030 5.31202 2.67310 3.99539 5.51807 5.55532 5.58924 5.49537 4.79727 3.95103 0.91175 6.46631 5.23001 19 v - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01250 4.78373 5.50608 0.61958 0.77255 0.48576 0.95510 20 2.95710 5.04036 3.26672 3.13830 5.05455 3.54257 4.53843 4.63747 3.48517 4.22271 5.03883 1.14537 4.25973 3.75082 3.90170 1.14833 3.40774 4.03852 6.31873 4.96975 20 n - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01250 4.78373 5.50608 0.61958 0.77255 0.48576 0.95510 21 3.85064 5.71991 3.70905 3.71766 5.27594 4.11796 5.11708 5.29720 4.17358 4.82950 5.84458 0.23712 4.83422 4.46700 4.49744 3.92560 4.29833 4.80641 6.43786 5.21674 21 N - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01250 4.78373 5.50608 0.61958 0.77255 0.48576 0.95510 22 4.51327 5.99344 4.53922 4.45481 4.41119 4.57836 0.17447 5.39806 4.31252 4.71965 5.89734 4.79692 5.20168 4.85832 4.47780 4.60740 4.88013 5.10847 5.81434 4.35444 22 H - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01250 4.78373 5.50608 0.61958 0.77255 0.48576 0.95510 23 1.90448 4.76751 3.55228 1.97211 4.09466 3.79442 4.25123 3.03625 3.19206 3.06060 4.00313 3.57183 4.27619 3.51029 3.58045 3.12552 3.22373 1.32438 5.54592 4.28243 23 v - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.46829 4.78373 1.00632 0.61958 0.77255 0.48576 0.95510 24 3.36081 5.30245 3.31842 3.10827 4.53341 3.74892 4.26035 4.26718 2.90162 3.71800 4.75913 3.56224 4.32539 0.59227 3.16460 3.40122 3.66994 3.97434 5.72858 4.46956 24 Q - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01327 4.32871 * 0.61958 0.77255 0.00000 * //