HMMER3/f [3.1b1 | May 2013] NAME Thaumatin_msa_1 LENG 36 ALPH amino RF no MM no CONS yes CS no MAP yes DATE Wed Mar 26 10:06:48 2014 NSEQ 6 EFFN 2.153320 CKSUM 4279982120 STATS LOCAL MSV -7.4279 0.71964 STATS LOCAL VITERBI -7.9270 0.71964 STATS LOCAL FORWARD -4.5737 0.71964 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.26999 3.82389 3.20611 3.35610 3.53563 2.24955 4.20819 2.97297 3.08908 2.72998 4.09589 2.95242 2.66386 3.17874 3.01190 2.99707 2.59465 2.66176 3.20391 3.74308 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01392 4.67750 5.39984 0.61958 0.77255 0.00000 * 1 0.29760 4.81981 4.51151 4.42098 5.08575 3.61166 5.30676 4.36416 4.46540 4.19400 5.17397 4.29604 4.42551 4.72736 4.60077 3.18563 3.51949 3.84866 6.40388 5.34086 1 A - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01392 4.67750 5.39984 0.61958 0.77255 0.48576 0.95510 2 2.94764 5.16061 3.14271 2.74536 4.61086 3.62862 3.97001 4.02954 2.10890 3.59476 4.41335 2.33830 4.11620 3.11892 3.03065 2.96935 1.19402 3.65304 5.77374 4.45199 2 t - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01392 4.67750 5.39984 0.61958 0.77255 0.48576 0.95510 3 3.67072 4.93274 5.44098 4.96257 1.37083 4.92110 4.93079 1.07027 4.81327 2.08460 3.47659 4.98948 5.15543 4.84805 4.84019 4.31182 3.90911 2.43470 5.11361 3.65519 3 i - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01392 4.67750 5.39984 0.61958 0.77255 0.48576 0.95510 4 3.01444 5.31538 2.84105 2.00552 4.72912 3.58331 4.02671 4.17155 2.87294 3.73930 4.55992 2.44392 4.12341 3.18257 3.34716 3.00160 1.11781 3.78061 5.93384 4.54893 4 t - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01392 4.67750 5.39984 0.61958 0.77255 0.48576 0.95510 5 3.40062 4.67550 5.34401 4.80513 1.70550 4.76402 5.14794 1.70832 4.67095 2.25605 3.53828 4.89326 5.02985 4.80306 4.74086 4.12714 3.64278 1.10142 5.49388 4.25552 5 v - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01392 4.67750 5.39984 0.61958 0.77255 0.48576 0.95510 6 3.32504 4.62589 5.20179 4.68816 3.96902 4.69755 5.28958 1.34705 4.58353 2.60747 3.79458 4.83150 5.02748 4.82493 4.74291 4.07397 2.00714 1.06620 5.80856 4.59902 6 v - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01392 4.67750 5.39984 0.61958 0.77255 0.48576 0.95510 7 3.68166 5.57858 3.54326 3.53790 5.10694 3.97494 4.93624 5.08338 3.96721 4.63331 5.63675 0.29050 4.68498 4.27093 4.29990 3.75256 4.12053 4.60814 6.29355 5.04380 7 N - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01392 4.67750 5.39984 0.61958 0.77255 0.48576 0.95510 8 3.27938 5.55877 3.57461 2.95113 5.03673 3.91645 3.89328 4.40515 1.47011 3.80481 4.63109 1.64246 4.28579 3.01010 1.61145 3.24346 3.45459 4.03722 5.82967 4.61364 8 k - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01392 4.67750 5.39984 0.61958 0.77255 0.48576 0.95510 9 3.19759 0.60675 4.42217 4.08644 3.93811 3.88511 2.35577 3.90085 3.78299 3.57310 4.56007 4.20229 4.53570 4.24062 3.96412 3.41986 3.61069 3.59612 5.43136 4.00458 9 C - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01392 4.67750 5.39984 0.61958 0.77255 0.48576 0.95510 10 2.77696 4.99628 3.17907 2.70765 4.51392 3.52634 3.94189 3.95502 2.72166 3.52453 4.31687 3.19799 1.87087 2.20883 3.16993 1.84670 2.45177 3.54686 5.72220 4.37983 10 s - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01392 4.67750 5.39984 0.61958 0.77255 0.48576 0.95510 11 3.73733 5.17340 4.63685 4.17014 1.98939 4.54893 3.91378 3.72300 3.88468 3.16880 4.29754 4.22345 4.88366 4.15367 1.91160 3.87233 3.95665 3.57200 4.17989 0.89507 11 y - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01392 4.67750 5.39984 0.61958 0.77255 0.48576 0.95510 12 3.10606 4.93117 4.43387 4.30997 4.97608 3.72489 5.22507 4.23917 4.27602 4.06062 5.09834 4.31224 4.50652 4.63071 4.43968 3.32091 0.32400 3.81703 6.30574 5.20910 12 T - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01392 4.67750 5.39984 0.61958 0.77255 0.48576 0.95510 13 3.57655 4.79482 5.60808 5.16438 4.15259 5.13513 5.93855 1.56761 5.09284 2.57509 3.89343 5.32184 5.39744 5.36645 5.26967 4.58409 3.84876 0.58008 6.27795 5.04486 13 V - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01392 4.67750 5.39984 0.61958 0.77255 0.48576 0.95510 14 4.93252 5.95832 5.45687 5.39174 3.91026 4.77412 5.20117 5.10826 5.18056 4.33374 5.68226 5.43318 5.35951 5.51234 5.14295 5.13460 5.28539 5.00632 0.14847 3.88353 14 W - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01392 4.67750 5.39984 0.61958 0.77255 0.48576 0.95510 15 1.08924 4.63408 4.10981 3.90608 4.94022 3.41191 4.92517 4.32221 3.97118 4.04749 4.90069 3.92952 1.08328 4.23978 4.21935 2.90856 3.24030 3.72704 6.27748 5.12321 15 p - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01545 4.57342 5.29577 0.61958 0.77255 0.48576 0.95510 16 0.98218 4.51121 4.07501 3.91055 4.96693 1.18543 4.92403 4.38992 4.03046 4.10651 4.91838 3.86512 4.09829 4.25028 4.26048 2.78287 3.12965 3.70603 6.29085 5.15888 16 a - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01545 4.57342 5.29577 0.61958 0.77255 0.48576 0.95510 17 0.56591 4.50945 4.11840 3.95718 4.94844 2.15979 4.94496 4.35660 4.06021 4.08775 4.90798 3.88936 4.10679 4.28239 4.27646 2.79240 3.13655 3.68942 6.27889 5.15269 17 A - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01708 4.47436 5.19671 0.61958 0.77255 0.48576 0.95510 18 2.84657 4.35690 4.29120 3.75605 3.49799 3.91382 4.38891 2.44234 3.63206 1.55371 3.45555 3.96742 4.34190 3.89053 3.83888 2.27740 3.12055 1.48610 5.10880 3.90599 18 v - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01708 4.47436 5.19671 0.61958 0.77255 0.48576 0.95510 19 3.74414 5.35479 4.41724 4.36628 5.24876 4.01090 5.35294 5.00373 4.48569 4.53725 5.63717 4.59725 0.21330 4.85072 4.62461 3.93838 4.23573 4.56893 6.22064 5.38893 19 P - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01708 4.47436 5.19671 0.61958 0.77255 0.48576 0.95510 20 1.53848 4.46298 3.90498 3.75848 4.88699 0.82868 4.81844 4.30368 3.90991 4.02478 4.84668 3.76411 4.03255 4.13852 4.15242 2.72826 3.07504 3.63717 6.20603 5.06445 20 g - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01895 4.37121 5.09355 0.61958 0.77255 0.48576 0.95510 21 3.40319 5.09958 4.17535 4.14956 5.22703 0.25512 5.20833 4.97818 4.39621 4.55536 5.55532 4.34236 4.50230 4.68171 4.54935 3.59348 3.92132 4.40952 6.16083 5.35551 21 G - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01895 4.37121 5.09355 0.61958 0.77255 0.48576 0.95510 22 3.40319 5.09958 4.17535 4.14956 5.22703 0.25512 5.20833 4.97818 4.39621 4.55536 5.55532 4.34236 4.50230 4.68171 4.54935 3.59348 3.92132 4.40952 6.16083 5.35551 22 G - - - 2.68622 4.42229 2.77523 2.73127 3.46358 2.40471 3.72498 3.29358 2.67745 2.69359 4.24694 2.90351 2.73743 3.18150 2.89805 2.37891 2.77523 2.98522 4.58481 3.61507 0.22856 1.61857 5.09355 0.21211 1.65484 0.48576 0.95510 23 2.83590 4.83563 3.37184 2.79213 4.07399 3.64618 3.80038 3.40892 2.41503 3.05344 3.93755 3.24563 4.03853 2.09033 2.07669 2.92048 3.05913 1.86413 5.33720 4.07783 24 v - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01895 4.37121 5.09355 0.61958 0.77255 0.48576 0.95510 24 3.42263 5.48615 3.95957 3.14848 5.04797 3.97482 3.79731 4.34133 1.39751 3.70578 4.59307 3.49443 4.31079 2.92593 1.00053 3.40227 3.54590 4.03027 5.67650 4.58050 25 r - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01895 4.37121 5.09355 0.61958 0.77255 0.48576 0.95510 25 3.77075 5.10071 4.99234 4.66167 3.41071 4.61277 5.16751 2.66449 4.42894 0.43850 3.32449 4.89276 4.97945 4.67087 4.51189 4.28832 4.05092 2.82597 5.43966 4.26954 26 L - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01895 4.37121 5.09355 0.61958 0.77255 0.48576 0.95510 26 3.61935 5.73485 0.40645 2.79458 5.20095 3.67549 4.48669 4.92339 3.68053 4.44788 5.46449 3.36661 4.36338 3.74502 4.24401 3.54329 3.97688 4.51663 6.25803 5.02676 27 D - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01895 4.37121 5.09355 0.61958 0.77255 0.48576 0.95510 27 1.86944 4.74628 3.28239 2.78820 4.30821 3.42758 3.90699 3.70871 2.61971 3.32031 4.15152 3.21844 1.90308 3.07943 2.12057 2.75545 2.98730 3.33177 5.54518 4.26291 28 a - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01895 4.37121 5.09355 0.61958 0.77255 0.48576 0.95510 28 3.40319 5.09958 4.17535 4.14956 5.22703 0.25512 5.20833 4.97818 4.39621 4.55536 5.55532 4.34236 4.50230 4.68171 4.54935 3.59348 3.92132 4.40952 6.16083 5.35551 29 G - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01895 4.37121 5.09355 0.61958 0.77255 0.48576 0.95510 29 3.41014 5.34339 3.36243 3.15709 4.58015 3.78752 4.30778 4.32504 2.94864 3.77112 4.81522 3.60988 4.36690 0.55521 3.20902 3.45092 3.72118 4.03069 5.76890 4.51558 30 Q - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01895 4.37121 5.09355 0.61958 0.77255 0.48576 0.95510 30 2.85006 4.85935 3.51899 2.97873 4.39373 3.57074 3.94037 3.74735 2.45713 3.35821 4.23869 3.36474 4.07493 3.11811 1.53260 2.94263 1.50973 3.40986 5.56258 4.33202 31 t - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.18626 4.37121 1.84957 0.61958 0.77255 0.48576 0.95510 31 3.95306 5.19645 4.64135 4.43961 3.09271 4.13889 4.37732 4.00762 4.16433 3.33841 4.62301 4.52585 4.68665 4.53353 4.22879 4.15327 4.27341 3.90630 0.41580 3.07952 32 W - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02236 4.20731 4.92966 0.61958 0.77255 0.69058 0.69572 32 1.14263 4.25046 3.65911 3.37899 4.44328 3.04074 4.41211 3.81751 3.41999 3.55010 4.38523 3.47122 3.80787 3.69951 3.71033 1.48773 2.81923 3.26365 5.80104 4.59802 33 a - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02236 4.20731 4.92966 0.61958 0.77255 0.69058 0.69572 33 3.42334 4.70638 5.11066 4.58045 3.26646 4.74755 5.11511 1.42947 4.41712 0.99177 3.06211 4.81136 4.92926 4.54596 4.52225 4.13220 3.65647 2.09728 5.37602 4.27474 34 l - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02236 4.20731 4.92966 0.61958 0.77255 0.69058 0.69572 34 2.57469 4.45394 3.00752 2.47354 3.81182 3.37643 3.56675 3.27514 2.46156 2.92625 3.68934 1.97977 3.72652 2.79439 2.89482 2.63077 2.79642 2.99355 4.81956 3.79884 35 n - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02236 4.20731 4.92966 0.61958 0.77255 0.69058 0.69572 35 2.55987 4.07679 3.44825 2.92201 3.31940 3.49105 3.72109 2.71911 2.86987 2.45039 2.02572 3.28012 3.82326 3.14589 3.18231 2.79670 2.78119 2.50957 4.52761 3.52802 36 m - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02236 4.20731 4.92966 0.61958 0.77255 0.69058 0.69572 36 3.26043 4.94712 3.90556 3.80215 4.74716 3.61640 4.83999 4.39458 3.89134 3.97793 5.05057 4.06915 0.38873 4.26904 4.08697 3.44121 3.73035 3.99862 5.82687 4.87641 37 P - - - 2.68302 4.42275 2.77569 2.73173 3.46404 2.40424 3.72544 3.29404 2.67791 2.69405 4.24740 2.90396 2.73789 3.18196 2.89850 2.37937 2.77469 2.98445 4.58527 3.61553 0.43326 1.04525 * 1.91360 0.15964 0.00000 * //