HMMER3/f [3.1b1 | May 2013] NAME Uperin_msa LENG 17 ALPH amino RF no MM no CONS yes CS no MAP yes DATE Tue Dec 10 17:45:24 2013 NSEQ 3 EFFN 3.000000 CKSUM 3244866933 STATS LOCAL MSV -6.3896 0.73804 STATS LOCAL VITERBI -6.3868 0.73804 STATS LOCAL FORWARD -3.5488 0.73804 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.49116 5.14773 3.36537 4.25210 3.42107 2.37527 4.03694 2.19338 2.21851 2.77510 4.47185 2.83074 4.85278 4.51920 3.26184 2.85678 3.38767 1.56926 6.10988 4.88743 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.00000 * 1 4.38137 5.94081 5.22664 5.27215 6.19954 0.08431 6.19771 6.15946 5.56295 5.60855 6.66681 5.39550 5.33385 5.81061 5.58400 4.59559 4.92251 5.50436 6.92319 6.36842 1 G - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 2 3.81074 5.18723 5.53612 5.31808 4.61167 4.79531 6.03761 2.58028 5.23451 3.17087 4.49373 5.34410 5.36627 5.55797 5.34702 4.44980 4.18522 0.27818 6.51146 5.29766 2 V - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 3 3.43911 5.16297 4.56860 4.35525 4.51259 0.75128 5.20065 3.89157 4.31952 1.24996 4.60858 4.50095 4.79651 4.65064 4.50998 3.68375 3.87759 3.69981 6.06646 4.86201 3 g - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 4 3.47987 5.85366 0.77517 2.81142 5.53998 3.75870 4.53756 5.13491 3.66669 4.64266 5.51341 3.37123 4.46223 3.73187 4.29079 1.42115 3.86248 4.59333 6.75339 5.24825 4 d - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 5 1.55885 4.72565 4.99158 4.44182 1.60914 4.43299 4.73230 2.80532 4.28957 1.37566 3.47998 4.53902 4.78709 4.42296 4.37933 3.77055 3.56653 2.77467 5.15775 3.87310 5 l - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 6 3.92309 5.15501 5.75046 5.29393 1.45397 5.21373 5.20221 0.82734 5.15117 2.26495 3.67730 5.29716 5.42555 5.15548 5.15758 4.62599 4.16334 2.55632 5.34166 3.86945 6 i - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 7 3.90400 5.88027 4.38990 3.65025 5.03930 4.39734 1.52115 4.79626 2.44961 4.14449 5.06500 3.97594 4.76522 3.42500 0.76757 3.89368 4.04063 4.49371 5.94511 4.71819 7 r - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 8 4.39942 6.12840 4.64246 4.17909 5.79396 4.61603 4.88629 5.35693 0.20070 4.71863 5.71531 4.51427 5.11690 4.08594 3.28682 4.43275 4.61403 5.03784 6.46104 5.51309 8 K - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 9 1.70380 4.80879 5.51565 5.02331 4.20917 4.94548 5.63170 1.19497 4.93078 2.80469 4.01027 5.13363 5.27743 5.16979 5.07846 4.34376 3.80191 1.14855 6.10392 4.88765 9 v - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 10 1.38085 4.76829 5.09237 4.76996 4.46873 4.09191 5.44448 2.65661 4.67570 3.18390 4.32871 4.64930 4.77448 4.91312 4.81565 3.55959 3.58940 0.77488 6.21029 5.01804 10 v - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 11 2.82038 4.75269 4.44675 4.23865 5.22804 3.53291 5.19280 4.66984 4.26342 4.37677 5.17769 4.14308 4.35256 4.51269 4.48441 0.74302 1.30065 3.96501 6.56826 5.41556 11 s - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 12 1.41739 4.77049 5.09986 4.77770 4.46826 4.10154 5.45249 2.64551 4.68355 3.17910 4.32643 4.65790 4.78228 4.92145 4.82319 3.56945 3.59432 0.75529 6.21435 5.02147 12 v - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 13 3.80226 4.97958 5.93735 5.51082 4.41127 5.48848 6.39021 0.74395 5.48196 2.78183 4.11187 5.67814 5.69572 5.76761 5.67290 4.96172 4.07032 1.06362 6.63725 5.39480 13 i - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 14 4.39942 6.12840 4.64246 4.17909 5.79396 4.61603 4.88629 5.35693 0.20070 4.71863 5.71531 4.51427 5.11690 4.08594 3.28682 4.43275 4.61403 5.03784 6.46104 5.51309 14 K - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 15 4.08816 5.91649 3.94732 3.97285 5.51096 4.31989 5.36934 5.59237 4.46242 5.09856 6.13005 0.17987 5.04264 4.74155 4.77236 4.16946 4.54680 5.08075 6.63553 5.45868 15 N - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 16 3.79577 4.97452 5.92976 5.50367 4.42286 5.47919 6.38490 1.23168 5.47458 2.79958 4.12403 5.66943 5.69131 5.76589 5.66809 4.95179 4.06450 0.63578 6.64282 5.39444 16 V - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 17 1.41739 4.77049 5.09986 4.77770 4.46826 4.10154 5.45249 2.64551 4.68355 3.17910 4.32643 4.65790 4.78228 4.92145 4.82319 3.56945 3.59432 0.75529 6.21435 5.02147 17 v - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00730 4.92341 * 0.61958 0.77255 0.00000 * //