HMMER3/f [3.1b1 | May 2013] NAME Myticin_msa LENG 40 ALPH amino RF no MM no CONS yes CS no MAP yes DATE Tue Dec 10 17:37:27 2013 NSEQ 3 EFFN 0.963867 CKSUM 2719035553 STATS LOCAL MSV -8.1852 0.71950 STATS LOCAL VITERBI -8.5378 0.71950 STATS LOCAL FORWARD -3.9370 0.71950 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.61327 2.08271 3.73510 3.44062 3.20783 2.56987 3.04014 3.28444 2.82973 2.62097 4.00948 3.61889 3.68715 3.61329 2.98716 2.43451 2.83878 2.95653 4.70389 2.85479 2.68577 4.42235 2.77530 2.73079 3.46364 2.40523 3.72505 3.29364 2.67751 2.69365 4.24700 2.90357 2.73750 3.18072 2.89811 2.37897 2.77530 2.98529 4.58487 3.61513 0.24776 1.55139 4.89233 0.97524 0.47337 0.00000 * 1 2.94009 5.11949 2.95223 2.59344 4.03780 3.54229 1.72125 3.87803 2.35757 3.38056 4.26110 3.08407 4.00346 1.94395 2.67236 2.93488 3.17257 3.55340 5.31592 3.88990 4 h - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 2 2.40760 4.38884 3.31452 3.04269 4.40880 3.10159 4.20568 3.87537 3.13093 3.53030 4.36387 3.30986 2.08420 3.44836 3.47791 1.18837 2.87015 3.34625 5.72275 4.46581 5 s - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 3 2.77468 4.56282 3.45704 3.01483 3.39647 3.59980 1.75983 3.00620 2.84531 2.74014 3.74041 3.39532 4.06903 3.27798 3.14968 2.95207 3.05312 1.90228 4.91535 3.48591 6 h - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 4 1.26912 4.27784 3.99090 3.59406 3.89513 3.39222 4.46063 2.58400 3.52237 2.74456 3.81147 3.72138 4.05093 3.82160 3.78006 2.82076 2.95530 1.68155 5.48344 4.27080 7 a - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 5 2.97484 0.49536 4.54644 4.36143 4.29819 3.52546 4.94453 3.50335 4.19488 3.39949 4.53393 4.27130 4.25418 4.52897 4.26250 3.24554 3.46724 3.22466 5.63781 4.58072 8 C - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 6 2.60365 4.44575 3.72657 3.50611 4.26579 3.27188 4.49629 3.43118 3.45513 3.28365 4.32307 3.65743 4.00296 3.83688 3.69181 2.80933 0.75188 3.09218 5.67581 4.48572 9 t - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 7 2.48896 4.40765 3.49642 3.33737 4.39045 3.13356 4.43291 3.95928 3.43208 3.65980 4.56715 3.50521 3.89915 3.75907 3.70074 0.71714 2.99334 3.42682 5.74042 4.47895 10 s - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 8 3.70558 5.07261 4.29206 4.08637 2.37091 4.18817 3.80036 3.67717 3.93636 3.05150 4.32238 4.10990 4.65919 4.16827 4.05455 3.80841 3.99603 3.56292 4.02282 0.58549 11 Y - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 9 3.85508 5.05115 4.76639 4.47316 1.98532 4.52386 3.52405 3.64334 4.23963 2.95261 4.20438 4.17504 4.83300 4.23900 4.26137 3.91184 4.07082 3.54096 1.91515 0.91157 12 y - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 10 2.97484 0.49536 4.54644 4.36143 4.29819 3.52546 4.94453 3.50335 4.19488 3.39949 4.53393 4.27130 4.25418 4.52897 4.26250 3.24554 3.46724 3.22466 5.63781 4.58072 13 C - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 11 2.35306 4.32213 3.37540 3.16834 4.54140 1.80842 4.33765 4.02368 3.32747 3.68203 4.49556 3.36348 3.79820 3.60014 3.65453 1.12725 2.85211 3.40914 5.85034 4.62349 14 s - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 12 3.27269 5.22401 3.46689 3.04571 4.67978 3.71719 3.96319 4.13100 0.69201 3.63591 4.59132 3.45299 4.20471 3.14494 2.53803 3.30112 3.50855 3.82570 5.61882 4.48011 15 K - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 13 3.66382 4.98093 4.64978 4.42996 0.62693 4.26403 4.04670 3.16210 4.33239 2.46721 3.85334 4.36871 4.72275 4.42006 4.37789 3.91165 3.96857 3.17316 4.22470 2.56148 16 F - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 14 2.97484 0.49536 4.54644 4.36143 4.29819 3.52546 4.94453 3.50335 4.19488 3.39949 4.53393 4.27130 4.25418 4.52897 4.26250 3.24554 3.46724 3.22466 5.63781 4.58072 17 C - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 15 3.07871 4.81379 3.81251 3.75473 4.87104 0.38902 4.84634 4.55343 3.97587 4.16619 5.15178 3.97816 4.21349 4.27705 4.16930 3.26077 3.58290 4.02406 5.87701 4.98658 18 G - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 16 2.34892 4.28556 3.52882 3.21230 4.30929 3.08026 4.26894 3.66726 3.21989 3.40079 4.25302 3.39352 3.80893 3.53964 3.53126 1.61502 1.32787 3.18238 5.66872 4.44154 19 t - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 17 0.65756 4.36912 3.79256 3.61044 4.37609 3.18343 4.59323 3.54832 3.63520 3.41514 4.42233 3.67589 3.95182 3.95025 3.85725 2.72110 3.01972 3.14944 5.77229 4.61013 20 A - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 18 2.35745 4.32193 3.36343 3.18456 4.55948 1.21428 4.36457 4.04623 3.36929 3.70841 4.52514 3.37261 3.80262 3.63513 3.68858 1.61671 2.86239 3.42347 5.87065 4.64743 21 g - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 19 2.97484 0.49536 4.54644 4.36143 4.29819 3.52546 4.94453 3.50335 4.19488 3.39949 4.53393 4.27130 4.25418 4.52897 4.26250 3.24554 3.46724 3.22466 5.63781 4.58072 22 C - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 20 2.34892 4.28556 3.52882 3.21230 4.30929 3.08026 4.26894 3.66726 3.21989 3.40079 4.25302 3.39352 3.80893 3.53964 3.53126 1.61502 1.32787 3.18238 5.66872 4.44154 23 t - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 21 2.81125 4.76705 3.37613 2.77989 3.80480 3.62293 2.44072 3.34981 2.33400 2.08614 3.84534 3.21761 4.00117 2.93616 2.01548 2.90169 3.02416 3.09649 5.12873 3.80767 24 r - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 22 3.70558 5.07261 4.29206 4.08637 2.37091 4.18817 3.80036 3.67717 3.93636 3.05150 4.32238 4.10990 4.65919 4.16827 4.05455 3.80841 3.99603 3.56292 4.02282 0.58549 25 Y - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 23 2.68717 4.49246 3.54858 3.21100 3.82652 1.35495 4.19612 3.15879 3.16344 1.80446 3.90455 3.51731 4.03477 3.53271 3.45785 2.88679 3.06197 2.91631 5.30881 4.03646 26 g - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 24 2.97484 0.49536 4.54644 4.36143 4.29819 3.52546 4.94453 3.50335 4.19488 3.39949 4.53393 4.27130 4.25418 4.52897 4.26250 3.24554 3.46724 3.22466 5.63781 4.58072 27 C - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 25 2.99068 4.87766 3.55101 2.97598 3.36557 3.73276 3.72519 3.50336 2.40140 3.04783 4.00514 3.36230 4.12637 3.06782 1.45709 3.07281 3.20684 3.26159 4.82070 2.03949 28 r - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 26 2.71175 4.38581 3.63220 3.12230 3.49772 3.67902 4.02603 2.56487 3.03518 1.84587 3.47748 2.39737 4.09663 3.37374 3.35436 2.97937 2.96997 1.86252 5.03904 3.78022 29 l - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 27 3.50702 4.88698 4.66667 4.31815 3.27744 4.35675 4.88193 2.50741 4.08357 0.57951 3.22548 4.56520 4.74740 4.37914 4.20668 3.97865 3.79124 2.62008 5.25360 4.04220 30 L - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 28 3.37902 5.12428 3.47179 3.27164 3.53890 3.73791 0.64492 4.12927 3.10875 3.58040 4.65499 3.66473 4.31163 3.64474 3.35118 3.45016 3.69688 3.85902 4.99704 3.48348 31 H - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 29 2.83971 4.85782 3.31639 2.86639 4.36663 3.48981 3.89958 3.81995 2.46112 3.38225 4.26498 3.28052 1.46453 3.08488 1.82747 2.91514 3.13899 3.46847 5.51293 4.28394 32 p - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 30 3.07871 4.81379 3.81251 3.75473 4.87104 0.38902 4.84634 4.55343 3.97587 4.16619 5.15178 3.97816 4.21349 4.27705 4.16930 3.26077 3.58290 4.02406 5.87701 4.98658 33 G - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 31 3.27269 5.22401 3.46689 3.04571 4.67978 3.71719 3.96319 4.13100 0.69201 3.63591 4.59132 3.45299 4.20471 3.14494 2.53803 3.30112 3.50855 3.82570 5.61882 4.48011 34 K - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 32 3.32851 4.63069 5.02814 4.45821 3.18051 4.62545 4.95269 1.54330 4.31997 1.22475 1.99527 4.67834 4.80677 4.40471 4.41071 3.97423 3.55026 2.19616 5.24344 4.18635 35 l - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 33 2.97484 0.49536 4.54644 4.36143 4.29819 3.52546 4.94453 3.50335 4.19488 3.39949 4.53393 4.27130 4.25418 4.52897 4.26250 3.24554 3.46724 3.22466 5.63781 4.58072 36 C - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 34 2.01977 4.39680 4.03990 3.52955 1.93684 3.86151 3.81178 2.82796 3.43503 2.46876 3.49501 3.72497 4.24498 3.64982 3.65602 3.16598 3.12392 2.65620 4.27043 1.87242 37 y - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 35 2.97484 0.49536 4.54644 4.36143 4.29819 3.52546 4.94453 3.50335 4.19488 3.39949 4.53393 4.27130 4.25418 4.52897 4.26250 3.24554 3.46724 3.22466 5.63781 4.58072 38 C - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 36 3.24460 4.60206 4.81912 4.30885 3.31158 4.46596 4.91306 2.07486 4.14483 1.03098 3.14035 4.53680 4.75489 4.35352 4.29878 3.84832 3.50108 1.53543 5.32763 4.17671 39 l - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 37 3.37902 5.12428 3.47179 3.27164 3.53890 3.73791 0.64492 4.12927 3.10875 3.58040 4.65499 3.66473 4.31163 3.64474 3.35118 3.45016 3.69688 3.85902 4.99704 3.48348 40 H - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 38 2.97484 0.49536 4.54644 4.36143 4.29819 3.52546 4.94453 3.50335 4.19488 3.39949 4.53393 4.27130 4.25418 4.52897 4.26250 3.24554 3.46724 3.22466 5.63781 4.58072 41 C - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 39 2.48896 4.40765 3.49642 3.33737 4.39045 3.13356 4.43291 3.95928 3.43208 3.65980 4.56715 3.50521 3.89915 3.75907 3.70074 0.71714 2.99334 3.42682 5.74042 4.47895 42 s - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02322 4.16999 4.89233 0.61958 0.77255 0.48576 0.95510 40 3.37418 5.17126 3.89825 3.35959 4.60339 3.79083 4.08606 4.17528 2.41886 3.63717 4.63844 3.69175 4.28700 3.29939 0.60587 3.44962 3.62495 3.88845 5.57017 4.47601 43 R - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01569 4.16246 * 0.61958 0.77255 0.00000 * //