Uperin

This family consists of wide-spectrum antibiotic peptides isolated from the Australian toadlet, Uperoleia mjobergii. Uperins are smaller than most other wide-spectrum antibiotic peptides isolated from amphibians. Uperins adopts a well-defined amphipathic alpha-helix with distinct hydrophilic and hydrophobic faces [PMID: 10461748].

The below sequences were used to create Uperin sequence signatures:

>CAMPSQ638
GVLDAFRKIATVVKNVV
>CAMPSQ639
GVGSFIHKVVSAIKNVA
>CAMPSQ641
GVGDLIRKAVSVIKNIV

The below sequences were retrieved using Uperin sequence signatures:

> CAMPUpeP, CAMPUpeH | CAMPSQ638 | P82032 | 7994711
GVLDAFRKIATVVKNVV
> CAMPUpeP, CAMPUpeH | CAMPSQ639 | P82035 | 7994714
GVGSFIHKVVSAIKNVA
> CAMPUpeP, CAMPUpeH | CAMPSQ641 | P82042 | 7994721
GVGDLIRKAVSVIKNIV
> CAMPUpeH | CAMPSQ6427 | P82033 | 7994712
GVLDAFRKIATVVKNLV
> CAMPUpeH | CAMPSQ6428 | P82034 | 7994713
GVLDAFKKIATVVKNLV
> CAMPUpeP, CAMPUpeH | CAMPSQ6429 | P82041 | 7994720
GVGDLIRKAVAAIKNIV
> CAMPUpeP, CAMPUpeH | CAMPSQ6430 | P82044 | 7994723
GVGDIFRKIVSTIKNVV
2015, © Biomedical Informatics Centre, NIRRH, Mumbai