Ascaphin

Ascaphin family of antibacterial peptides are secreted from the frog Ascaphus truei. This family of peptide exhibit no structural similarity with other antimicrobial peptides from frogs skin [PMID: 15207717].

The below sequences were used to create Ascaphin sequence signatures:

>CAMPSQ833
GFKDWIKGAAKKLIKTVASSIANQ
>CAMPSQ4332
GFRDVLKGAAKAFVKTVAGHIAN
>CAMPSQ831
GFRDVLKGAAKAFVKTVAGHIANI
>CAMPSQ3118
GFKDLLKGAAKALVKTVLF

The below sequences were retrieved using Ascaphin sequence signatures:

> CAMPAscP, CAMPAscH | CAMPSQ831 | P0CJ27 |
GFRDVLKGAAKAFVKTVAGHIANI
> CAMPAscP, CAMPAscH | CAMPSQ833 | P0CJ31 |
GFKDWIKGAAKKLIKTVASSIANQ
> CAMPAscP, CAMPAscH | CAMPSQ3115 | P0CJ26 |
GFRDVLKGAAKQFVKTVAGHIANI
> CAMPAscP, CAMPAscH | CAMPSQ3116 | P0CJ28 |
GFKDWIKGAAKKLIKTVAANIANQ
> CAMPAscP, CAMPAscH | CAMPSQ3117 | P0CJ30 |
GFKDWIKGAAKKLIKTVASSIANE
> CAMPAscP, CAMPAscH | CAMPSQ3118 | P0CJ32 |
GFKDLLKGAAKALVKTVLF
> CAMPAscP, CAMPAscH | CAMPSQ4332 | P0CJ25 |
GFRDVLKGAAKAFVKTVAGHIAN
> CAMPAscH | CAMPSQ4333 | P0CJ29 |
GIKDWIKGAAKKLIKTVASHIANQ
2015, © Biomedical Informatics Centre, NIRRH, Mumbai